BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002E09SP1|AL424982
(810 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1741 1494 0.0
>3x_Contig1741
Length = 21706
Score = 1494 bits (744), Expect = 0.0
Identities = 784/804 (97%), Gaps = 2/804 (0%)
Strand = Plus / Minus
Query: 1 acyaaagtcgtgatatgtttcgggtcaaaaaccttcactaatttccttctttgcataata 60
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4563 accaaagtcgtgatatgtttcgggtcaaaaaccttcactaatttccttctttgcataata 4504
Query: 61 attccattcattacgttacatgtagtatatcatgttttcctatacacatggagagatytc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4503 attccattcattacgttacatgtagtatatcatgttttcctatacacatggagagatctc 4444
Query: 121 gtgagtaacaatgtcgaaccatctgcgatacgtgcgcaaactcaaatgtyagaytacacg 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 4443 gtgagtaacaatgtcgaaccatctgcgatacgtgcgcaaactcaaatgtcagactacacg 4384
Query: 181 tatggctccatcaggagtycactgatgttacaatcgtcaaacaatgttgcgtatgtttca 240
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4383 tatggctccatcaggagtccactgatgttacaatcgtcaaacaatgttgcgtctgtttca 4324
Query: 241 tcaagccccgaaaatwttctgctttaccattctattcacccacctgctgacactcagttc 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4323 tcaagccccgaaaatattctgctttaccattctattcacccacctgctgacactcagttc 4264
Query: 301 caaactgatgatggtaggctactgcgactttctcgtactatagtaacatattggcaatcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4263 caaactgatgatggtaggctactgcgactttctcgtactatagtaacatattggcaatcg 4204
Query: 361 ctagcatcgaagtcatggcttattccaatcggtctcaccgtgtggtcagtgactgtattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4203 ctagcatcgaagtcatggcttattccaatcggtctcaccgtgtggtcagtgactgtattt 4144
Query: 421 gtacttggaatcatggctactatcaaattcaackgttwwtataygtagaatgtgggtagt 480
||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||
Sbjct: 4143 gtacttggaatcatggctactatcaaattcaacggttaaaatacgtagaatgtgggtagt 4084
Query: 481 tcaaycttataagaaccataccatggcaattagtctttaccgtaatgctgcagttaatac 540
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4083 tcaa-cttataagaaccataccatggcaattagtctttaccgtaatgctgcagttaatac 4025
Query: 541 caaggacgatagtaatctgcccctctctatatgttatcatattcatattcaggcggtaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4024 caaggacgatagtaatctgcccctctctatatgttatcatattcatattcaggcggtaaa 3965
Query: 601 tcacgcatgtacagtttatgagagctagcttagttaaggatagaacaaaaaaactcttct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3964 tcacgcatgtacagtttatgagagctagcttagttaaggatagaacaaaaaaactcttct 3905
Query: 661 gacctttcaacggtccgattttttagaagtacatttcctccgtactgcatwcacttactt 720
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3904 gacctttcaacggtccgattttttagaagtacatttcctccgtactgcattcacttactt 3845
Query: 721 atttaaartwtcaatttrgtacctcaggaagaggccttgagccttggcattttactgcac 780
||||||| | ||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3844 atttaaagtttcaatttggtacctcaggaagaggccttgagccttggcatttt-ctgcac 3786
Query: 781 tattgcttatgtattacctaaaaa 804
|||||||||||| || ||||||||
Sbjct: 3785 tattgcttatgtttttcctaaaaa 3762
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4132
Number of Sequences: 1807
Number of extensions: 4132
Number of successful extensions: 77
Number of sequences better than 1.0e-20: 1
length of query: 810
length of database: 10,358,551
effective HSP length: 16
effective length of query: 794
effective length of database: 10,329,639
effective search space: 8201733366
effective search space used: 8201733366
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)